Showing posts with label code. Show all posts
Showing posts with label code. Show all posts

2012-09-16

scientific reproducibility police

At coffee this morning, Christopher Stumm (Etsy), Dan Foreman-Mackey (NYU), and I worked up the following idea of Stumm's: Every week, on a blog or (I prefer) in a short arXiv-only white paper, one refereed paper is taken from the scientific literature and its results are reproduced, as well as possible, given the content of the paper and the available data. I expect almost every paper to fail (that is, not be reproducible), of course, because almost every paper contains proprietary code or data or else is too vague to specify what was done. The astronomical literature is particularly interesting for this because many papers are based on public data; for those it comes down only to code and procedures; indeed I remember Bob Hanisch (STScI) giving a talk at ADASS showing that it is very hard to reproduce the results of typical papers based on HST data, despite the fact that all the data and almost all the code people use on them are public.

Stumm, Foreman-Mackey, and I discussed economic models and incentive models to make this happen. I think whoever did this would succeed scientifically, if he or she did it well, both because it would have huge impact and because it would create many new insights. But on the other hand it would take significant guts and a hell of a lot of time. If you want to do it, sign me up as one of your reproducibility agents! I think anyone involved would learn a huge amount about the science (more than they learn about reproducibility). In the end, it is the community that would benefit most, though. Radical!